Bioinformatics | Genomics | Oncology Imputing abundance of over 2,500 surface proteins from single-cell transcriptomes with context-agnostic zero-shot deep ensembles. September 7, 2024
Bioinformatics | Computational Biology | Genomics scNODE : generative model for temporal single cell transcriptomic data prediction. September 4, 2024
Bioinformatics | Genomics SFINN: inferring gene regulatory network from single-cell and spatial transcriptomic data with shared factor neighborhood and integrated neural network. July 1, 2024
Bioinformatics | Computational Biology | Genomics PredGCN: A Pruning-enabled Gene-Cell Net for Automatic Cell Annotation of Single Cell Transcriptome Data. June 26, 2024
Bioinformatics | Oncology | Pathology Inferring single-cell spatial gene expression with tissue morphology via explainable deep learning. June 25, 2024
Developmental Biology | Neurology | Neuroscience Spatial Single-cell Analysis Decodes Cortical Layer and Area Specification. June 25, 2024
Bioinformatics | Machine Learning | Oncology A deep learning method for classification of HNSCC and HPV patients using single-cell transcriptomics. June 14, 2024
Bioinformatics | Genomics Deep Batch Integration and Denoise of Single-Cell RNA-Seq Data. May 23, 2024
Developmental Biology | Stem Cell Research | Transcriptomics Reconstructing developmental trajectories using latent dynamical systems and time-resolved transcriptomics. May 16, 2024
Bioinformatics | Genetics | Oncology CopyVAE: a variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics. April 27, 2024
Bioinformatics | Biomedicine | Clinical Research scNovel: a scalable deep learning-based network for novel rare cell discovery in single-cell transcriptomics. March 30, 2024