Computational Biology | Genomics Machine and Deep Learning Methods for Predicting 3D Genome Organization. September 16, 2024
Bioinformatics | Genetics | Plant Science DeepCBA: a deep learning framework for gene expression prediction in maize based on DNA sequence and chromatin interaction. June 11, 2024
Computational Biology | Genomics Machine and deep learning methods for predicting 3D genome organization. March 18, 2024
Bioinformatics | Genomics ChromaFold predicts the 3D contact map from single-cell chromatin accessibility. August 7, 2023
Bioinformatics | Genetics IChrom-Deep: An Attention-Based Deep Learning Model for Identifying Chromatin Interactions. July 4, 2023
Bioinformatics | Computational Biology | Genomics Predicting Chromatin Interactions from DNA Sequence Using DeepC. February 1, 2023
Epigenetics | Genomics | Molecular Biology DeepLoop robustly maps chromatin interactions from sparse allele-resolved or single-cell Hi-C data at kilobase resolution. July 11, 2022
Bioinformatics | Genomics Chromatin interaction aware gene regulatory modeling with graph attention networks. April 9, 2022
Bioinformatics | Genomics HiCNN2: Enhancing the Resolution of Hi-C Data Using an Ensemble of Convolutional Neural Networks. November 1, 2019