Bioinformatics | Genomics Decoding functional proteome information in model organisms using protein language models. July 4, 2024
Bioinformatics | Genomics State-of-the-RNArt: benchmarking current methods for RNA 3D structure prediction. May 15, 2024
Bioinformatics | Genomics | Microbiology DeepMicroClass sorts metagenomic contigs into prokaryotes, eukaryotes and viruses. May 7, 2024
Bioinformatics | Genomics Extending DeepTrio for sensitive detection of complex mutation patterns. February 12, 2024
Bioinformatics | Computational Biology SumoPred-PLM: human SUMOylation and SUMO2/3 sites Prediction using Pre-trained Protein Language Model. February 8, 2024
Bioinformatics | Genomics Predictions of DNA mechanical properties at a genomic scale reveal potentially new functional roles of DNA flexibility. November 13, 2023
Bioinformatics SnapKin: a snapshot deep learning ensemble for kinase-substrate prediction from phosphoproteomics data. November 13, 2023
Bioinformatics | Genomics MetaTransformer: deep metagenomic sequencing read classification using self-attention models. September 14, 2023
Bioinformatics | Genomics Prediction of G4 formation in live cells with epigenetic data: a deep learning approach. August 28, 2023
Bioinformatics | Genomics Machine learning based lineage tree reconstruction improved with knowledge of higher level relationships between cells and genomic barcodes. August 23, 2023
Oncology Prediction-oriented prognostic biomarker discovery with survival machine learning methods. June 19, 2023
Bioinformatics | Genomics RFcaller: a machine learning approach combined with read-level features to detect somatic mutations. June 1, 2023