Bioinformatics | Computational Biology Fatecode enables cell fate regulator prediction using classification-supervised autoencoder perturbation. July 10, 2024
Bioinformatics | Oncology | Radiology Cross-attention enables deep learning on limited omics-imaging-clinical data of 130 lung cancer patients. July 9, 2024
Bioinformatics | Oncology | Pathology Tracing unknown tumor origins with a biological-pathway-based transformer model. June 18, 2024
Bioinformatics | Genomics | Oncology Subtype-WGME enables whole-genome-wide multi-omics cancer subtyping. May 18, 2024
Oncology | Systems Biology A gray box framework that optimizes a white box logical model using a black box optimizer for simulating cellular responses to perturbations. May 14, 2024
Oncology | Pathology Nextflow pipeline for Visium and H&E data from patient-derived xenograft samples. April 16, 2024
Bioinformatics | Genomics | Oncology Anchored-fusion enables targeted fusion search in bulk and single-cell RNA sequencing data. March 19, 2024
Bioinformatics | Biomedical Engineering | Cell Biology PXPermute reveals staining importance in multichannel imaging flow cytometry. February 27, 2024
Bioinformatics | Genomics PolyAMiner-Bulk is a deep learning-based algorithm that decodes alternative polyadenylation dynamics from bulk RNA-seq data. February 7, 2024
Bioimaging | Cell Biology u-track3D: Measuring, navigating, and validating dense particle trajectories in three dimensions. December 2, 2023
Oncology | Pharmacology RECOVER identifies synergistic drug combinations inĀ vitro through sequential model optimization. October 5, 2023