Bioinformatics | Protein Engineering TemBERTure: advancing protein thermostability prediction with deep learning and attention mechanisms. July 23, 2024
Bioinformatics | Medical Informatics Deep IDA: a deep learning approach for integrative discriminant analysis of multi-omics data with feature ranking-an application to COVID-19. July 19, 2024
Bioinformatics | Microbiology Network depth affects inference of gene sets from bacterial transcriptomes using denoising autoencoders. July 19, 2024
Bioinformatics | Genomics Single-cell type annotation with deep learning in 265 cell types for humans. April 22, 2024
Bioinformatics | Molecular Biology nanoBERT: a deep learning model for gene agnostic navigation of the nanobody mutational space. April 1, 2024
Oncology | Pharmacogenomics MMDRP: drug response prediction and biomarker discovery using multi-modal deep learning. February 19, 2024
Bioinformatics | Genetics DeepRegFinder: deep learning-based regulatory elements finder. February 12, 2024
Bioinformatics | Computational Biology | Drug Discovery SAGDTI: self-attention and graph neural network with multiple information representations for the prediction of drug-target interactions. January 29, 2024
Bioinformatics | Genomics Batch correction of single-cell sequencing data via an autoencoder architecture. January 12, 2024
Bioinformatics | Molecular Biology Seq2Phase: language model-based accurate prediction of client proteins in liquid-liquid phase separation. January 11, 2024
Biology | Medicine Adversarial training improves model interpretability in single-cell RNA-seq analysis. December 15, 2023
Bioinformatics | Computational Biology | Genomics XHap: haplotype assembly using long-distance read correlations learned by transformers. December 13, 2023