Bioinformatics | Computational Biology | Drug Discovery 3DProtDTA: a deep learning model for drug-target affinity prediction based on residue-level protein graphs. April 3, 2023
Biotechnology | Microbiology | Phage therapy Characterization of bacteriophages, KP1 and KP12, with deep learning-based structure prediction. February 10, 2023
Biochemistry | Molecular Biology Impact of Asp/Glu-ADP-ribosylation on protein-protein interaction and protein function. December 1, 2022
Bioinformatics | Computational Biology Deep learning for protein secondary structure prediction: Pre and post-AlphaFold. November 24, 2022
Bioinformatics | Molecular Biology | Protein Engineering | Structural Biology Robust deep learning-based protein sequence design using ProteinMPNN. October 19, 2022
Bioinformatics | Drug Discovery | Structural Biology HProteome-BSite: predicted binding sites and ligands in human 3D proteome. October 16, 2022
Artificial Intelligence | Bioinformatics | Structural Biology AlphaFold, Artificial Intelligence (AI), and Allostery. August 17, 2022
Bioinformatics | Pharmacology | Structural Biology Comparative studies of AlphaFold, RoseTTAFold and Modeller: a case study involving the use of G-protein-coupled receptors. August 9, 2022
Bioinformatics | Structural Biology Benchmarking AlphaFold for protein complex modeling reveals accuracy determinants. July 28, 2022
Bioinformatics | Proteomics | Structural Biology AlphaFold Models of Small Proteins Rival the Accuracy of Solution NMR Structures. June 30, 2022
Bioinformatics | Protein structure prediction Collective Variable for Metadynamics Derived From AlphaFold Output. June 30, 2022
Bioinformatics | Proteomics | Structural Biology A3D Database: Structure-based Predictions of Protein Aggregation for the Human Proteome. April 21, 2022