Bioinformatics | Molecular Biology EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks. January 28, 2024
Bioinformatics | Structural Biology lociPARSE: a locality-aware invariant point attention model for scoring RNA 3D structures. November 20, 2023
Bioinformatics | Molecular Biology EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks. September 25, 2023
Bioinformatics | Computational Biology iQDeep: an integrated web server for protein scoring using multiscale deep learning models. June 25, 2023
Bioinformatics | Structural Biology PIQLE: protein-protein interface quality estimation by deep graph learning of multimeric interaction geometries. June 23, 2023
Bioinformatics | Protein Modeling | Structural Biology Contact-Assisted Threading in Low-Homology Protein Modeling. March 24, 2023
Bioinformatics | Structural Biology PIQLE: protein-protein interface quality estimation by deep graph learning of multimeric interaction geometries. February 24, 2023
Bioinformatics | Molecular Biology rrQNet: protein contact map quality estimation by deep evolutionary reconciliation. June 25, 2022
Bioinformatics | Protein structure prediction DeepRefiner: high-accuracy protein structure refinement by deep network calibration. May 17, 2021
Bioinformatics | Protein structure prediction QDeep: distance-based protein model quality estimation by residue-level ensemble error classifications using stacked deep residual neural networks. July 13, 2020
Bioinformatics | Computational Biology | Structural Biology Evaluating the significance of contact maps in low-homology protein modeling using contact-assisted threading. February 20, 2020
Bioinformatics | Proteomics | Structural Biology DeepQA: improving the estimation of single protein model quality with deep belief networks. December 2, 2018