Bioinformatics | Molecular Biology EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks. September 25, 2023
Bioinformatics | Computational Biology Integration of pre-trained protein language models into geometric deep learning networks. August 25, 2023
Bioinformatics | Protein Engineering Structure-Informed Protein Language Models are Robust Predictors for Variant Effects. August 14, 2023
Bioinformatics | Proteomics Tree visualizations of protein sequence embedding space enable improved functional clustering of diverse protein superfamilies. January 15, 2023
Bioinformatics | Proteomics Alignment-free estimation of sequence conservation for identifying functional sites using protein sequence embeddings. January 11, 2023
Bioinformatics | Genetics | Molecular Biology SHINE: protein language model-based pathogenicity prediction for short inframe insertion and deletion variants. December 28, 2022
Bioinformatics | Immunology BepiPred-3.0: Improved B-cell epitope prediction using protein language models. November 29, 2022
Biology | Biotechnology NetSurfP-3.0: accurate and fast prediction of protein structural features by protein language models and deep learning. June 1, 2022