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Bioinformatics | Mass Spectrometry | Proteomics Systematic Assessment of Deep Learning-Based Predictors of Fragmentation Intensity Profiles. May 10, 2024
Bioinformatics | Chemistry | Data Science MassDash: A Web-Based Dashboard for Data-Independent Acquisition Mass Spectrometry Visualization. April 29, 2024
Bioinformatics | Proteomics AlphaFun: Structural-Alignment-Based Proteome Annotation Reveals why the Functionally Unknown Proteins (uPE1) Are So Understudied. April 16, 2024
Bioinformatics | Cell Biology | Proteomics Recent Advancements in Subcellular Proteomics: Growing Impact of Organellar Protein Niches on the Understanding of Cell Biology. March 7, 2024
Bioinformatics | Proteomics AttnPep: A Self-Attention-Based Deep Learning Method for Peptide Identification in Shotgun Proteomics. January 22, 2024
Cell Biology | Genetics | Immunology ARID3C Acts as a Regulator of Monocyte-to-Macrophage Differentiation Interacting with NPM1. January 17, 2024
Bioinformatics | Proteomics Test-Time Training for Deep MS/MS Spectrum Prediction Improves Peptide Identification. December 28, 2023
Bioinformatics | Molecular Biology O-GlcNAcPRED-DL: Prediction of Protein O-GlcNAcylation Sites Based on an Ensemble Model of Deep Learning. December 6, 2023
Bioinformatics | Proteomics Merging Full-Spectrum and Fragment Ion Intensity Predictions from Deep Learning for High-Quality Spectral Libraries. November 1, 2023
Bioinformatics | Computational Biology LMPhosSite: A Deep Learning-Based Approach for General Protein Phosphorylation Site Prediction Using Embeddings from the Local Window Sequence and Pretrained Protein Language Model. July 17, 2023