Bioinformatics | Computational Biology | Proteomics SpecEncoder: deep metric learning for accurate peptide identification in proteomics. June 28, 2024
Bioinformatics | Proteomics ESMSec: Prediction of Secreted Proteins in Human Body Fluids Using Protein Language Models and Attention. June 27, 2024
Bioinformatics | Hepatology | Proteomics Imputation of label-free quantitative mass spectrometry-based proteomics data using self-supervised deep learning. June 26, 2024
Bioinformatics | Drug Discovery | Proteomics Benchmarking AlphaFold3’s protein-protein complex accuracy and machine learning prediction reliability for binding free energy changes upon mutation. June 25, 2024
Bioinformatics | Proteomics Sitetack: A Deep Learning Model that Improves PTM Prediction by Using Known PTMs. June 19, 2024
Biochemistry | Cell Biology | Proteomics Mapping adipocyte interactome networks by HaloTag-enrichment-mass spectrometry. June 17, 2024
Drug Discovery | Pharmacology | Proteomics | Target Identification An end-to-end method for predicting compound-protein interactions based on simplified homogeneous graph convolutional network and pre-trained language model. June 7, 2024
Bioinformatics | Computational Biology | Proteomics MoRF_ESM: Prediction of MoRFs in disordered proteins based on a deep transformer protein language model. May 30, 2024
Bioinformatics | Proteomics Co-training based prediction of multi-label protein-protein interactions. May 24, 2024
Bioinformatics | Computational Biology | Proteomics Transferable deep generative modeling of intrinsically disordered protein conformations. May 23, 2024
Bioinformatics | Computational Biology | Proteomics Rapid and accurate prediction of protein homo-oligomer symmetry with Seq2Symm. May 15, 2024
Bioinformatics | Genetics | Molecular Biology | Proteomics PreMode predicts mode-of-action of missense variants by deep graph representation learning of protein sequence and structural context. May 15, 2024