BEAS-Net: a Shape-Prior-Based Deep Convolutional Neural Network for Robust Left Ventricular Segmentation in 2D Echocardiography.

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Abstract

Left ventricle (LV) segmentation of 2D echocardiography images is an essential step in the analysis of cardiac morphology and function and – more generally – diagnosis of cardiovascular diseases. Several deep learning (DL) algorithms have recently been proposed for the automatic segmentation of the LV, showing significant performance improvement over the traditional segmentation algorithms. However, unlike the traditional methods, prior information about the segmentation problem, e.g. anatomical shape information, is not usually incorporated for training the DL algorithms. This can degrade the generalization performance of the DL models on unseen images if their characteristics are somewhat different from those of the training images, e.g. low-quality testing images. In this study, a new shape-constrained deep convolutional neural network (CNN) – called BEAS-Net – is introduced for automatic LV segmentation. The BEAS-Net learns how to associate the image features, encoded by its convolutional layers, with anatomical shape-prior information derived by the B-spline explicit active surface (BEAS) algorithm to generate physiologically meaningful segmentation contours when dealing with artifactual or low-quality images. The performance of the proposed network was evaluated using three different in-vivo datasets and was compared a deep segmentation algorithm based on the U-Net model. Both networks yielded comparable results when tested on images of acceptable quality, but the BEAS-Net outperformed the benchmark DL model on artifactual and low-quality images.